Banner

Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs4717685 chr7:72251134 A/G TYW1B chr7:72023729-72298777:- 1.27 9.01 3.36E-12 Box Plot
ACC rs4717688 chr7:72280682 C/T TYW1B chr7:72023729-72298777:- 1.2 7.77 2.92E-10 Box Plot
ACC rs4717821 chr7:73240993 A/G WBSCR27 chr7:73248920-73256865:- 0.67 5.54 1.01E-6 Box Plot
ACC rs4718186 chr7:64481547 G/A INTS4L1 chr7:64601603-64694600:+ 0.71 5.2 3.36E-6 Box Plot
ACC rs4718187 chr7:64481966 G/A INTS4L1 chr7:64601603-64694600:+ 0.73 5.2 3.44E-6 Box Plot
ACC rs4718188 chr7:64522519 C/T INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs4718190 chr7:64541235 C/T INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs4728708 chr7:76011592 A/G UPK3B chr7:76139745-76145838:+ 0.71 5.48 1.27E-6 Box Plot
ACC rs4728710 chr7:76012666 A/G UPK3B chr7:76139745-76145838:+ 0.74 5.61 7.87E-7 Box Plot
ACC rs4760702 chr12:48780840 A/T COL2A1 chr12:48366748-48398269:- 1.26 5.13 4.4E-6 Box Plot
ACC rs4785412 chr16:50385468 T/C CYLD chr16:50775961-50835846:+ 0.58 5.32 2.21E-6 Box Plot
ACC rs4785413 chr16:50392394 C/T CYLD chr16:50775961-50835846:+ 0.58 5.32 2.21E-6 Box Plot
ACC rs4793229 chr17:41418334 C/T NBR2 chr17:41277627-41305688:+ 0.88 6.75 1.26E-8 Box Plot
ACC rs4794845 chr17:27353024 C/T SLC13A2 chr17:26800311-26824799:+ 0.58 5.39 1.72E-6 Box Plot
ACC rs4794846 chr17:27353069 C/T SLC13A2 chr17:26800311-26824799:+ 0.58 5.37 1.84E-6 Box Plot